ReMap 2015

An integrative ChIP-seq analysis of regulatory elements

Cross your genomic regions against the ReMap catalogue of transcription factor binding sites. You can annotate any BED file and calculate statistical enrichments in TFs in your regions based on their binding sites.


Input data


  • Upload a file :
  • Paste your data :
  • Information about UCSC BED format and Ensembl IDs.

Settings
  • Extend genes to kb upstream of TSSs and kb downstream of TESs

  • Minimum percentage of overlap : %
  • .. applied on our catalogue of binding sites
  • .. applied on your submitted regions

  • Apply the minimum percentage of overlap on both data
          (our catalogue of binding sites and your submitted regions)