RSAT - Variation information

Get information (position, variants) about genomic variations, given a set of genomic regions (return overlapping variations) or a list of variation IDS (return the list of variations maching query IDs).

Locally installed variants were directly downloaded from ensembl, specific versions for each installed genome can be consulted here, updates can be done on demand.

Conceptionc, implementationi and testingt: Jacques van Heldencit , Alejandra Medina-Riveracit , Walter Santanacit , Jeremy Delerceci , Yvon Mbouambouat

Genomes in the RSAT Prokaryotes server were recently re-installed. Genome names now follow the NCBI standard to easily identify assemblies, if you cannot find your genome please check this naming list to find the correct ID: Genome IDs list

[List of organisms with variations]
not seeing your favorite organism in the list ? Contact us to have it installed

Variations IDs or genomic regions of interest 

    Upload variants or regions

   URL of variants file or genomic regions available on a Web server (e.g. Galaxy).

Input format 


      [Sample Output] MANUAL

AMR and WS are supported by a PAPIIT-UNAM (IA206517) grant.