ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ADNP

Function : activity dependent neuroprotector homeobox
Description : Vasoactive intestinal peptide is a neuroprotective factor that has a stimulatory effect on the growth of some tumor cells and an inhibitory effect on others. This gene encodes a protein that is upregulated by vasoactive intestinal peptide and may be involved in its stimulatory effect on certain tumor cells. The encoded protein contains one homeobox and nine zinc finger domains, suggesting that it functions as a transcription factor. This gene is also upregulated in normal proliferative tissues. Finally, the encoded protein may increase the viability of certain cell types through modulation of p53 activity. Alternatively spliced transcript variants encoding the same protein have been described. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains, Helix-turn-helix domains
Class C2H2 zinc finger factors, Homeo domain factors
Family Factors with multiple dispersed zinc fingers, HD-ZF factors
Sub Family unclassified, ADNP

External references

Ensembl ENSG00000101126
RefSeq NP_001269461
Uniprot Q9H2P0
Aliases ADNP1, HVDAS, MRD28
UCSC Gene coordinates chr20:50888917-50934983

External Links

JASPAR ADNP
Wikipedia ADNP
WikiGenes ADNP
Transcription Factor Encylopedia ADNP    
GeneCards ADNP
FactorBook ADNP


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ADNP

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ADNP