ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ReMap update v1 patch 2

8 March 2018
In this v1.2 patch we changed BED file names to follow a more robust and logic naming convention.

For All, Public, ENCODE BED files For TF and Cell lines

remap2018_all_macs2_hg38_v1_2.bed
remap2018_nr_macs2_hg38_v1_2.bed
remap2018_crm_macs2_hg38_v1_2.bed

remap2018_encode_all_macs2_hg38_v1_2.bed
remap2018_encode_nr_macs2_hg38_v1_2.bed
remap2018_encode_crm_macs2_hg38_v1_2.bed

remap2018_public_all_macs2_hg38_v1_2.bed
remap2018_public_nr_macs2_hg38_v1_2.bed
remap2018_public_crm_macs2_hg38_v1_2.bed

remap2018_MCF7_all_macs2_hg38_v1_2.bed
remap2018_TP53_nr_macs2_hg38_v1_2.bed
remap2018_GATA3_macs2_hg38_v1_2.bed

ReMap update v1

7 February 2018
For all datasets we applied the following:
  • NKX2 was corrected to NKX2-1 and NKX2-2
  • NKX3 was renamed to NKX3-1
  • RAC3 was renamed as NCOA3

Comments: All BED files in the download section now have a “v1” suffix in the their name to indicate the update.