ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ARID3A

Function : AT-rich interaction domain 3A
Description : This gene encodes a member of the ARID (AT-rich interaction domain) family of DNA binding proteins. It was found by homology to the Drosophila dead ringer gene, which is important for normal embryogenesis. Other ARID family members have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation, and possibly in chromatin structure modification. [provided by RefSeq, Jul 2008]

Classification  

Super Class Helix-turn-helix domains
Class ARID domain factors
Family ARID-related factors
Sub Family ARID3

External references

Ensembl ENSG00000116017
RefSeq NP_005215
Uniprot Q99856
Aliases BRIGHT, DRIL1, DRIL3, E2FBP1
UCSC Gene coordinates chr19:925732-975933

External Links

JASPAR MA0151.1
Wikipedia ARID3A
WikiGenes ARID3A
Transcription Factor Encylopedia ARID3A    
GeneCards ARID3A
FactorBook ARID3A


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ARID3A

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ARID3A