ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

BRD1

Function : bromodomain containing 1
Description : This gene encodes a bromodomain-containing protein that localizes to the nucleus and can interact with DNA and histone tails. The encoded protein is a component of the MOZ/MORF acetyltransferase complex and can stimulate acetylation of histones H3 and H4, thereby potentially playing a role in gene activation. Variation in this gene is associated with schizophrenia and bipolar disorder in some study populations. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2017]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000100425
RefSeq NP_001291738
Uniprot O95696
Aliases BRL, BRPF1, BRPF2
UCSC Gene coordinates chr22:49773277-49827926

External Links

JASPAR BRD1
Wikipedia BRD1
WikiGenes BRD1
Transcription Factor Encylopedia BRD1    
GeneCards BRD1
FactorBook BRD1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for BRD1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for BRD1