ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

BRD4

Function : bromodomain containing 4
Description : The protein encoded by this gene is homologous to the murine protein MCAP, which associates with chromosomes during mitosis, and to the human RING3 protein, a serine/threonine kinase. Each of these proteins contains two bromodomains, a conserved sequence motif which may be involved in chromatin targeting. This gene has been implicated as the chromosome 19 target of translocation t(15;19)(q13;p13.1), which defines an upper respiratory tract carcinoma in young people. Two alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000141867
RefSeq NP_490597
Uniprot O60885
Aliases CAP, HUNK1, HUNKI, MCAP
UCSC Gene coordinates chr19:15236835-15332542

External Links

JASPAR BRD4
Wikipedia BRD4
WikiGenes BRD4
Transcription Factor Encylopedia BRD4    
GeneCards BRD4
FactorBook BRD4


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for BRD4

MACS - Datasets excluded for BRD4

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for BRD4