ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

CEBPB

Function : CCAAT/enhancer binding protein beta
Description : This intronless gene encodes a transcription factor that contains a basic leucine zipper (bZIP) domain. The encoded protein functions as a homodimer but can also form heterodimers with CCAAT/enhancer-binding proteins alpha, delta, and gamma. Activity of this protein is important in the regulation of genes involved in immune and inflammatory responses, among other processes. The use of alternative in-frame AUG start codons results in multiple protein isoforms, each with distinct biological functions. [provided by RefSeq, Oct 2013]

Classification  

Super Class Basic domains
Class Basic leucine zipper factors (bZIP)
Family C/EBP-related
Sub Family C/EBP

External references

Ensembl ENSG00000172216
RefSeq NP_001272807
Uniprot P17676
Aliases C/EBP-beta, IL6DBP, NF-IL6, TCF5
UCSC Gene coordinates chr20:50190582-50192689

External Links

JASPAR MA0466.2
Wikipedia CEBPB
WikiGenes CEBPB
Transcription Factor Encylopedia CEBPB    
GeneCards CEBPB
FactorBook CEBPB


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for CEBPB

MACS - Datasets excluded for CEBPB

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for CEBPB