ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

CHD1

Function : chromodomain helicase DNA binding protein 1
Description : The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000153922
RefSeq NP_001261
Uniprot O14646
Aliases PILBOS
UCSC Gene coordinates chr5:98855203-98929013

External Links

JASPAR CHD1
Wikipedia CHD1
WikiGenes CHD1
Transcription Factor Encylopedia CHD1    
GeneCards CHD1
FactorBook CHD1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for CHD1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for CHD1