ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

CHD2

Function : chromodomain helicase DNA binding protein 2
Description : The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000173575
RefSeq NP_001262
Uniprot O14647
Aliases EEOC
UCSC Gene coordinates chr15:92900320-93028006

External Links

JASPAR CHD2
Wikipedia CHD2
WikiGenes CHD2
Transcription Factor Encylopedia CHD2    
GeneCards CHD2
FactorBook CHD2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for CHD2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for CHD2