ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

CHD7

Function : chromodomain helicase DNA binding protein 7
Description : This gene encodes a protein that contains several helicase family domains. Mutations in this gene have been found in some patients with the CHARGE syndrome. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2015]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000171316
RefSeq NP_060250
Uniprot Q9P2D1
Aliases CRG, HH5, IS3, KAL5
UCSC Gene coordinates chr8:60678743-60868027

External Links

JASPAR CHD7
Wikipedia CHD7
WikiGenes CHD7
Transcription Factor Encylopedia CHD7    
GeneCards CHD7
FactorBook CHD7


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for CHD7

MACS - Datasets excluded for CHD7

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for CHD7