ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

CUX1

Function : cut like homeobox 1
Description : The protein encoded by this gene is a member of the homeodomain family of DNA binding proteins. It may regulate gene expression, morphogenesis, and differentiation and it may also play a role in the cell cycle progession. Several alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Feb 2011]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000257923
RefSeq NP_001189475
Uniprot P39880, Q13948
Aliases CASP, CDP, CDP/Cut, CDP1, COY1, CUTL1, CUX, Clox, Cux/CDP, GOLIM6, Nbla10317, p100, p110, p200, p75
UCSC Gene coordinates chr7:101815903-102283957

External Links

JASPAR MA0754.1
Wikipedia CUX1
WikiGenes CUX1
Transcription Factor Encylopedia CUX1    
GeneCards CUX1
FactorBook CUX1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for CUX1

MACS - Datasets excluded for CUX1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for CUX1