ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

DEAF1

Function : DEAF1, transcription factor
Description : This gene encodes a zinc finger domain-containing protein that functions as a regulator of transcription. The encoded proteins binds to its own promoter as well as to that of several target genes. Activity of this protein is important in the regulation of embryonic development. Mutations in this gene have been found in individuals with autosomal dominant cognitive disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]

Classification  

Super Class alpha-Helices exposed by beta-structures
Class SAND domain factors
Family DEAF
Sub Family None

External references

Ensembl ENSG00000177030
RefSeq NP_001280563
Uniprot O75398
Aliases MRD24, NUDR, SPN, ZMYND5
UCSC Gene coordinates chr11:644219-695753

External Links

JASPAR DEAF1
Wikipedia DEAF1
WikiGenes DEAF1
Transcription Factor Encylopedia DEAF1    
GeneCards DEAF1
FactorBook DEAF1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for DEAF1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for DEAF1