ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

EGR1

Function : early growth response 1
Description : The protein encoded by this gene belongs to the EGR family of C2H2-type zinc-finger proteins. It is a nuclear protein and functions as a transcriptional regulator. The products of target genes it activates are required for differentitation and mitogenesis. Studies suggest this is a cancer suppressor gene. [provided by RefSeq, Dec 2014]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family Three-zinc finger Krüppel-related factors
Sub Family EGR factors

External references

Ensembl ENSG00000120738
RefSeq NP_001955
Uniprot P18146
Aliases AT225, G0S30, KROX-24, NGFI-A, TIS8, ZIF-268, ZNF225
UCSC Gene coordinates chr5:138465491-138469314

External Links

JASPAR MA0162.3
Wikipedia EGR1
WikiGenes EGR1
Transcription Factor Encylopedia EGR1    
GeneCards EGR1
FactorBook EGR1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for EGR1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for EGR1