ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ESRRA

Function : estrogen related receptor alpha
Description : The protein encoded by this gene is a nuclear receptor that is closely related to the estrogen receptor. This protein acts as a site-specific transcription regulator and has been also shown to interact with estrogen and the transcripton factor TFIIB by direct protein-protein contact. The binding and regulatory activities of this protein have been demonstrated in the regulation of a variety of genes including lactoferrin, osteopontin, medium-chain acyl coenzyme A dehydrogenase (MCAD) and thyroid hormone receptor genes. A processed pseudogene of ESRRA is located on chromosome 13q12.1. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2013]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Nuclear receptors with C4 zinc fingers
Family Steroid hormone receptors (NR3)
Sub Family ER-like receptors (NR3A&B)

External references

Ensembl ENSG00000173153
RefSeq NP_004442
Uniprot P11474
Aliases ERR1, ERRa, ERRalpha, ESRL1, NR3B1
UCSC Gene coordinates chr11:64305527-64316742

External Links

JASPAR MA0592.2
Wikipedia ESRRA
WikiGenes ESRRA
Transcription Factor Encylopedia ESRRA
GeneCards ESRRA
FactorBook ESRRA


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ESRRA

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ESRRA