ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ETV6

Function : ETS variant 6
Description : This gene encodes an ETS family transcription factor. The product of this gene contains two functional domains: a N-terminal pointed (PNT) domain that is involved in protein-protein interactions with itself and other proteins, and a C-terminal DNA-binding domain. Gene knockout studies in mice suggest that it is required for hematopoiesis and maintenance of the developing vascular network. This gene is known to be involved in a large number of chromosomal rearrangements associated with leukemia and congenital fibrosarcoma. [provided by RefSeq, Sep 2008]

Classification  

Super Class Helix-turn-helix domains
Class Tryptophan cluster factors
Family Ets-related factors
Sub Family ETV6-like factors

External references

Ensembl ENSG00000139083
RefSeq NP_001978
Uniprot P41212
Aliases TEL, TEL/ABL, THC5
UCSC Gene coordinates chr12:11649600-11895401

External Links

JASPAR MA0645.1
Wikipedia ETV6
WikiGenes ETV6
Transcription Factor Encylopedia ETV6    
GeneCards ETV6
FactorBook ETV6


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ETV6

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ETV6