ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATA1

Function : GATA binding protein 1
Description : This gene encodes a protein which belongs to the GATA family of transcription factors. The protein plays an important role in erythroid development by regulating the switch of fetal hemoglobin to adult hemoglobin. Mutations in this gene have been associated with X-linked dyserythropoietic anemia and thrombocytopenia. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Two zinc-finger GATA factors

External references

Ensembl ENSG00000102145
RefSeq NP_002040
Uniprot P15976
Aliases ERYF1, GATA-1, GF-1, GF1, NF-E1, NFE1, XLANP, XLTDA, XLTT
UCSC Gene coordinates chrX:48786539-48794310

External Links

JASPAR MA0035.3
Wikipedia GATA1
WikiGenes GATA1
Transcription Factor Encylopedia GATA1
GeneCards GATA1
FactorBook GATA1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATA1

MACS - Datasets excluded for GATA1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATA1