ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATA2

Function : GATA binding protein 2
Description : This gene encodes a member of the GATA family of zinc-finger transcription factors that are named for the consensus nucleotide sequence they bind in the promoter regions of target genes. The encoded protein plays an essential role in regulating transcription of genes involved in the development and proliferation of hematopoietic and endocrine cell lineages. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Mar 2009]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Two zinc-finger GATA factors

External references

Ensembl ENSG00000179348
RefSeq NP_116027
Uniprot P23769
Aliases DCML, IMD21, MONOMAC, NFE1B
UCSC Gene coordinates chr3:128479421-128493186

External Links

JASPAR MA0036.3
Wikipedia GATA2
WikiGenes GATA2
Transcription Factor Encylopedia GATA2    
GeneCards GATA2
FactorBook GATA2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATA2

MACS - Datasets excluded for GATA2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATA2