ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATA3

Function : GATA binding protein 3
Description : This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is an important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia. [provided by RefSeq, Nov 2009]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Two zinc-finger GATA factors

External references

Ensembl ENSG00000107485
RefSeq NP_001002295
Uniprot P23771
Aliases HDR, HDRS
UCSC Gene coordinates chr10:8045420-8075200

External Links

JASPAR MA0037.3
Wikipedia GATA3
WikiGenes GATA3
Transcription Factor Encylopedia GATA3    
GeneCards GATA3
FactorBook GATA3


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATA3

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATA3