ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATA4

Function : GATA binding protein 4
Description : This gene encodes a member of the GATA family of zinc-finger transcription factors. Members of this family recognize the GATA motif which is present in the promoters of many genes. This protein is thought to regulate genes involved in embryogenesis and in myocardial differentiation and function, and is necessary for normal testicular development. Mutations in this gene have been associated with cardiac septal defects. Additionally, alterations in gene expression have been associated with several cancer types. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2015]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Two zinc-finger GATA factors

External references

Ensembl ENSG00000136574
RefSeq NP_001295023
Uniprot P43694
Aliases ASD2, TACHD, TOF, VSD1
UCSC Gene coordinates chr8:11676918-11760001

External Links

JASPAR MA0482.1
Wikipedia GATA4
WikiGenes GATA4
Transcription Factor Encylopedia GATA4    
GeneCards GATA4
FactorBook GATA4


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATA4

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATA4