ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATA6

Function : GATA binding protein 6
Description : This gene is a member of a small family of zinc finger transcription factors that play an important role in the regulation of cellular differentiation and organogenesis during vertebrate development. This gene is expressed during early embryogenesis and localizes to endo- and mesodermally derived cells during later embryogenesis and thereby plays an important role in gut, lung, and heart development. Mutations in this gene are associated with several congenital defects. [provided by RefSeq, Mar 2012]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Two zinc-finger GATA factors

External references

Ensembl ENSG00000141448
RefSeq NP_005248
Uniprot Q92908
Aliases -
UCSC Gene coordinates chr18:22169436-22202527

External Links

JASPAR MA1104.1
Wikipedia GATA6
WikiGenes GATA6
Transcription Factor Encylopedia GATA6    
GeneCards GATA6
FactorBook GATA6


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATA6

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATA6