ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GATAD1

Function : GATA zinc finger domain containing 1
Description : The protein encoded by this gene contains a zinc finger at the N-terminus, and is thought to bind to a histone modification site that regulates gene expression. Mutations in this gene have been associated with autosomal recessive dilated cardiomyopathy. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jun 2012]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Other C4 zinc finger-type factors
Family GATA-type zinc fingers
Sub Family Single GATA-type zinc-finger

External references

Ensembl ENSG00000157259
RefSeq NP_066990
Uniprot Q8WUU5
Aliases CMD2B, ODAG, RG083M05.2
UCSC Gene coordinates chr7:92447447-92494630

External Links

JASPAR GATAD1
Wikipedia GATAD1
WikiGenes GATAD1
Transcription Factor Encylopedia GATAD1    
GeneCards GATAD1
FactorBook GATAD1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GATAD1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GATAD1