ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

GFI1B

Function : growth factor independent 1B transcriptional repressor
Description : This gene encodes a zinc-finger containing transcriptional regulator that is primarily expressed in cells of hematopoietic lineage. The encoded protein complexes with numerous other transcriptional regulatory proteins including GATA-1, runt-related transcription factor 1 and histone deacetylases to control expression of genes involved in the development and maturation of erythrocytes and megakaryocytes. Mutations in this gene are the cause of the autosomal dominant platelet disorder, platelet-type bleeding disorder-17. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2014]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family More than 3 adjacent zinc finger factors
Sub Family GFI1 factors

External references

Ensembl ENSG00000165702
RefSeq NP_004179
Uniprot Q5VTD9
Aliases BDPLT17, ZNF163B
UCSC Gene coordinates chr9:132945544-132991696

External Links

JASPAR MA0483.1
Wikipedia GFI1B
WikiGenes GFI1B
Transcription Factor Encylopedia GFI1B    
GeneCards GFI1B
FactorBook GFI1B


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for GFI1B

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for GFI1B