ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

HCFC1

Function : host cell factor C1
Description : This gene is a member of the host cell factor family and encodes a protein with five Kelch repeats, a fibronectin-like motif, and six HCF repeats, each of which contains a highly specific cleavage signal. This nuclear coactivator is proteolytically cleaved at one of the six possible sites, resulting in the creation of an N-terminal chain and the corresponding C-terminal chain. The final form of this protein consists of noncovalently bound N- and C-terminal chains. The protein is involved in control of the cell cycle and transcriptional regulation during herpes simplex virus infection. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000172534
RefSeq NP_005325
Uniprot P51610
Aliases CFF, HCF, HCF-1, HCF1, HFC1, MRX3, PPP1R89, VCAF
UCSC Gene coordinates chrX:153947555-153971832

External Links

JASPAR HCFC1
Wikipedia HCFC1
WikiGenes HCFC1
Transcription Factor Encylopedia HCFC1    
GeneCards HCFC1
FactorBook HCFC1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for HCFC1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for HCFC1