ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

HDAC8

Function : histone deacetylase 8
Description : Histones play a critical role in transcriptional regulation, cell cycle progression, and developmental events. Histone acetylation/deacetylation alters chromosome structure and affects transcription factor access to DNA. The protein encoded by this gene belongs to class I of the histone deacetylase family. It catalyzes the deacetylation of lysine residues in the histone N-terminal tails and represses transcription in large multiprotein complexes with transcriptional co-repressors. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2009]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000147099
RefSeq NP_060956
Uniprot Q9BY41
Aliases CDA07, CDLS5, HD8, HDACL1, MRXS6, RPD3, WTS
UCSC Gene coordinates chrX:72329515-72573102

External Links

JASPAR HDAC8
Wikipedia HDAC8
WikiGenes HDAC8
Transcription Factor Encylopedia HDAC8    
GeneCards HDAC8
FactorBook HDAC8


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for HDAC8

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for HDAC8