ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

HMGN3

Function : high mobility group nucleosomal binding domain 3
Description : The protein encoded by this gene binds thyroid hormone receptor beta in the presence of thyroid hormone. The encoded protein, a member of the HMGN protein family, is thought to reduce the compactness of the chromatin fiber in nucleosomes, thereby enhancing transcription from chromatin templates. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. There is a related pseudogene on chromosome 1. [provided by RefSeq, Jan 2016]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000118418
RefSeq NP_001188291
Uniprot Q15651
Aliases PNAS-24, PNAS-25, TRIP7
UCSC Gene coordinates chr6:79201244-79234737

External Links

JASPAR HMGN3
Wikipedia HMGN3
WikiGenes HMGN3
Transcription Factor Encylopedia HMGN3    
GeneCards HMGN3
FactorBook HMGN3


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for HMGN3

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for HMGN3