ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

HOXB13

Function : homeobox B13
Description : This gene encodes a transcription factor that belongs to the homeobox gene family. Genes of this family are highly conserved among vertebrates and essential for vertebrate embryonic development. This gene has been implicated to play a role in fetal skin development and cutaneous regeneration. In mice, a similar gene was shown to exhibit temporal and spatial colinearity in the main body axis of the embryo, but was not expressed in the secondary axes, which suggests functions in body patterning along the axis. This gene and other HOXB genes form a gene cluster at chromosome the 17q21-22 region. [provided by RefSeq, Jul 2008]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HOX-related factors
Sub Family HOX9-13

External references

Ensembl ENSG00000159184
RefSeq NP_006352
Uniprot Q92826
Aliases PSGD
UCSC Gene coordinates chr17:48724762-48728748

External Links

JASPAR MA0901.1
Wikipedia HOXB13
WikiGenes HOXB13
Transcription Factor Encylopedia HOXB13    
GeneCards HOXB13
FactorBook HOXB13


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for HOXB13

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for HOXB13