ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

JARID2

Function : jumonji and AT-rich interaction domain containing 2
Description : This gene encodes a Jumonji- and AT-rich interaction domain (ARID)-domain-containing protein. The encoded protein is a DNA-binding protein that functions as a transcriptional repressor. This protein interacts with the Polycomb repressive complex 2 (PRC2) which plays an essential role in regulating gene expression during embryonic development. This protein facilitates the recruitment of the PRC2 complex to target genes. Alternate splicing results in multiple transcript variants. Mutations in this gene are associated with chronic myeloid malignancies. [provided by RefSeq, May 2012]

Classification  

Super Class Helix-turn-helix domains
Class ARID domain factors
Family ARID-related factors
Sub Family JARID2

External references

Ensembl ENSG00000008083
RefSeq NP_004964
Uniprot Q92833
Aliases JMJ
UCSC Gene coordinates chr6:15245974-15522041

External Links

JASPAR JARID2
Wikipedia JARID2
WikiGenes JARID2
Transcription Factor Encylopedia JARID2    
GeneCards JARID2
FactorBook JARID2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for JARID2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for JARID2