ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

JMJD1C

Function : jumonji domain containing 1C
Description : The protein encoded by this gene interacts with thyroid hormone receptors and contains a jumonji domain. It is a candidate histone demethylase and is thought to be a coactivator for key transcription factors. It plays a role in the DNA-damage response pathway by demethylating the mediator of DNA damage checkpoint 1 (MDC1) protein, and is required for the survival of acute myeloid leukemia. Mutations in this gene are associated with Rett syndrome and intellectual disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000171988
RefSeq NP_001309181
Uniprot Q15652
Aliases KDM3C, TRIP-8, TRIP8
UCSC Gene coordinates chr10:63167220-63522074

External Links

JASPAR JMJD1C
Wikipedia JMJD1C
WikiGenes JMJD1C
Transcription Factor Encylopedia JMJD1C    
GeneCards JMJD1C
FactorBook JMJD1C


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for JMJD1C

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for JMJD1C