ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

JMJD6

Function : arginine demethylase and lysine hydroxylase
Description : This gene encodes a nuclear protein with a JmjC domain. JmjC domain-containing proteins are predicted to function as protein hydroxylases or histone demethylases. This protein was first identified as a putative phosphatidylserine receptor involved in phagocytosis of apoptotic cells; however, subsequent studies have indicated that it does not directly function in the clearance of apoptotic cells, and questioned whether it is a true phosphatidylserine receptor. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000070495
RefSeq NP_001074930
Uniprot Q6NYC1
Aliases PSR, PTDSR, PTDSR1
UCSC Gene coordinates chr17:76712829-76726798

External Links

JASPAR JMJD6
Wikipedia JMJD6
WikiGenes JMJD6
Transcription Factor Encylopedia JMJD6    
GeneCards JMJD6
FactorBook JMJD6


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for JMJD6

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for JMJD6