ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

LHX2

Function : LIM homeobox 2
Description : This gene encodes a protein belonging to a large protein family, members of which carry the LIM domain, a unique cysteine-rich zinc-binding domain. The encoded protein may function as a transcriptional regulator. The protein can recapitulate or rescue phenotypes in Drosophila caused by a related protein, suggesting conservation of function during evolution. [provided by RefSeq, Jul 2008]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-LIM factors
Sub Family Lhx-2-like factors

External references

Ensembl ENSG00000106689
RefSeq NP_004780
Uniprot P50458
Aliases LH2, hLhx2
UCSC Gene coordinates chr9:124011609-124033162

External Links

JASPAR MA0700.1
Wikipedia LHX2
WikiGenes LHX2
Transcription Factor Encylopedia LHX2    
GeneCards LHX2
FactorBook LHX2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for LHX2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for LHX2