ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

LMO2

Function : LIM domain only 2
Description : LMO2 encodes a cysteine-rich, two LIM-domain protein that is required for yolk sac erythropoiesis. The LMO2 protein has a central and crucial role in hematopoietic development and is highly conserved. The LMO2 transcription start site is located approximately 25 kb downstream from the 11p13 T-cell translocation cluster (11p13 ttc), where a number T-cell acute lymphoblastic leukemia-specific translocations occur. Alternative splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Nov 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000135363
RefSeq NP_001135787
Uniprot P25791
Aliases LMO-2, RBTN2, RBTNL1, RHOM2, TTG2
UCSC Gene coordinates chr11:33858575-33892288

External Links

JASPAR LMO2
Wikipedia LMO2
WikiGenes LMO2
Transcription Factor Encylopedia LMO2    
GeneCards LMO2
FactorBook LMO2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for LMO2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for LMO2