Function : methyl-CpG binding domain protein 1
Description : The protein encoded by this gene is a member of a family of nuclear proteins related by the presence of a methyl-CpG binding domain (MBD). These proteins are capable of binding specifically to methylated DNA, and some members can also repress transcription from methylated gene promoters. This protein contains multiple domains: MBD at the N-terminus that functions both in binding to methylated DNA and in protein interactions; several CXXC-type zinc finger domains that mediate binding to non-methylated CpG dinucleotides; transcriptional repression domain (TRD) at the C-terminus that is involved in transcription repression and in protein interactions. Numerous alternatively spliced transcript variants encoding different isoforms have been noted for this gene.[provided by RefSeq, Feb 2011]
| Super Class | Zinc-coordinating DNA-binding domains |
| Class | CXXC zinc finger factors |
| Family | CpG-binding proteins |
| Sub Family | None |
| Ensembl | ENSG00000141644 |
| RefSeq | NP_001191070 |
| Uniprot | Q9UIS9 |
| Aliases | CXXC3, PCM1, RFT |
| UCSC Gene coordinates | chr18:50266881-50281773 |
| JASPAR | MBD1 |
| Wikipedia | MBD1 |
| WikiGenes | MBD1 |
| Transcription Factor Encylopedia | MBD1 |
| GeneCards | MBD1 |
| FactorBook | MBD1 |
| Datasets quality |
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DNA constraint | Motifs | |
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UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |
| Datasets quality |
|
|
DNA constraint | Motifs | |
|
UCSC genome browser |
| All peaks | BED file | ![]() |
| Merged peaks (non-redundant peaks) |
BED file | ![]() |
| Peak sequences | FASTA file |