ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

MEF2B

Function : myocyte enhancer factor 2B
Description : The product of this gene is a member of the MADS/MEF2 family of DNA binding proteins. The protein is thought to regulate gene expression, including expression of the smooth muscle myosin heavy chain gene. This region undergoes considerable alternative splicing, with transcripts supporting two non-overlapping loci (GeneID 729991 and 100271849) as well as numerous read-through transcripts that span both loci (annotated as GeneID 4207). Several isoforms of this protein are expressed from either this locus or from some of the read-through transcripts annotated on GeneID 4207. [provided by RefSeq, Jan 2014]

Classification  

Super Class alpha-Helices exposed by beta-structures
Class MADS box factors
Family Regulators of differentiation
Sub Family MEF-2

External references

Ensembl ENSG00000213999
RefSeq NP_001139257
Uniprot Q02080
Aliases RSRFR2
UCSC Gene coordinates chr19:19145566-19170288

External Links

JASPAR MA0660.1
Wikipedia MEF2B
WikiGenes MEF2B
Transcription Factor Encylopedia MEF2B
GeneCards MEF2B
FactorBook MEF2B


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for MEF2B

MACS - Datasets excluded for MEF2B

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for MEF2B