ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

MITF

Function : melanogenesis associated transcription factor
Description : The protein encoded by this gene is a transcription factor that contains both basic helix-loop-helix and leucine zipper structural features. The encoded protein regulates melanocyte development and is responsible for pigment cell-specific transcription of the melanogenesis enzyme genes. Heterozygous mutations in the this gene cause auditory-pigmentary syndromes, such as Waardenburg syndrome type 2 and Tietz syndrome. [provided by RefSeq, Aug 2017]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family bHLH-ZIP factors
Sub Family TFE3-like factors

External references

Ensembl ENSG00000187098
RefSeq NP_937802
Uniprot O75030
Aliases CMM8, COMMAD, MI, WS2, WS2A, bHLHe32
UCSC Gene coordinates chr3:69739434-69968336

External Links

JASPAR MA0620.2
Wikipedia MITF
WikiGenes MITF
Transcription Factor Encylopedia MITF    
GeneCards MITF
FactorBook MITF


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for MITF

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for MITF