ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

MYCN

Function : MYCN proto-oncogene, bHLH transcription factor
Description : This gene is a member of the MYC family and encodes a protein with a basic helix-loop-helix (bHLH) domain. This protein is located in the nucleus and must dimerize with another bHLH protein in order to bind DNA. Amplification of this gene is associated with a variety of tumors, most notably neuroblastomas. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2014]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family bHLH-ZIP factors
Sub Family Myc / Max factors

External references

Ensembl ENSG00000134323
RefSeq NP_001280162
Uniprot P04198
Aliases MODED, N-myc, NMYC, ODED, bHLHe37
UCSC Gene coordinates chr2:15940437-15947006

External Links

JASPAR MA0104.4
Wikipedia MYCN
WikiGenes MYCN
Transcription Factor Encylopedia MYCN    
GeneCards MYCN
FactorBook MYCN


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for MYCN

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for MYCN