ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

NEUROD1

Function : neuronal differentiation 1
Description : This gene encodes a member of the NeuroD family of basic helix-loop-helix (bHLH) transcription factors. The protein forms heterodimers with other bHLH proteins and activates transcription of genes that contain a specific DNA sequence known as the E-box. It regulates expression of the insulin gene, and mutations in this gene result in type II diabetes mellitus. [provided by RefSeq, Jul 2008]

Classification  

Super Class Basic domains
Class Basic helix-loop-helix factors (bHLH)
Family Tal-related factors
Sub Family Neurogenin / Atonal-like factors

External references

Ensembl ENSG00000162992
RefSeq NP_002491
Uniprot Q13562
Aliases BETA2, BHF-1, MODY6, NEUROD, bHLHa3
UCSC Gene coordinates chr2:181676105-181680664

External Links

JASPAR MA1109.1
Wikipedia NEUROD1
WikiGenes NEUROD1
Transcription Factor Encylopedia NEUROD1    
GeneCards NEUROD1
FactorBook NEUROD1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for NEUROD1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for NEUROD1