ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

NR5A2

Function : nuclear receptor subfamily 5 group A member 2
Description : The protein encoded by this gene is a DNA-binding zinc finger transcription factor and is a member of the fushi tarazu factor-1 subfamily of orphan nuclear receptors. The encoded protein is involved in the expression of genes for hepatitis B virus and cholesterol biosynthesis, and may be an important regulator of embryonic development. [provided by RefSeq, Jun 2016]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Nuclear receptors with C4 zinc fingers
Family FTZ-F1-related receptors (NR5)
Sub Family None

External references

Ensembl ENSG00000116833
RefSeq NP_995582
Uniprot O00482
Aliases B1F, B1F2, CPF, FTF, FTZ-F1, FTZ-F1beta, LRH-1, LRH1, hB1F-2
UCSC Gene coordinates chr1:200027601-200177423

External Links

JASPAR MA0505.1
Wikipedia NR5A2
WikiGenes NR5A2
Transcription Factor Encylopedia NR5A2
GeneCards NR5A2
FactorBook NR5A2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for NR5A2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for NR5A2