ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

ONECUT1

Function : one cut homeobox 1
Description : This gene encodes a member of the Cut homeobox family of transcription factors. Expression of the encoded protein is enriched in the liver, where it stimulates transcription of liver-expressed genes, and antagonizes glucocorticoid-stimulated gene transcription. This gene may influence a variety of cellular processes including glucose metabolism, cell cycle regulation, and it may also be associated with cancer. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-CUT factors
Sub Family ONECUT

External references

Ensembl ENSG00000169856
RefSeq NP_004489
Uniprot Q9UBC0
Aliases HNF-6, HNF6, HNF6A
UCSC Gene coordinates chr15:52756962-52790263

External Links

JASPAR ONECUT1
Wikipedia ONECUT1
WikiGenes ONECUT1
Transcription Factor Encylopedia ONECUT1
GeneCards ONECUT1
FactorBook ONECUT1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for ONECUT1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for ONECUT1