ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

PGR

Function : progesterone receptor
Description : This gene encodes a member of the steroid receptor superfamily. The encoded protein mediates the physiological effects of progesterone, which plays a central role in reproductive events associated with the establishment and maintenance of pregnancy. This gene uses two distinct promotors and translation start sites in the first exon to produce several transcript variants, both protein coding and non-protein coding. Two of the isoforms (A and B) are identical except for an additional 165 amino acids found in the N-terminus of isoform B and mediate their own response genes and physiologic effects with little overlap. [provided by RefSeq, Sep 2015]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Nuclear receptors with C4 zinc fingers
Family Steroid hormone receptors (NR3)
Sub Family GR-like receptors (NR3C)

External references

Ensembl ENSG00000082175
RefSeq NP_001189403
Uniprot P06401
Aliases NR3C3, PR
UCSC Gene coordinates chr11:101029623-101130680

External Links

JASPAR PGR
Wikipedia PGR
WikiGenes PGR
Transcription Factor Encylopedia PGR
GeneCards PGR
FactorBook PGR


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for PGR

MACS - Datasets excluded for PGR

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for PGR