ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

PRDM14

Function : PR/SET domain 14
Description : This gene encodes a member of the PRDI-BF1 and RIZ homology domain containing (PRDM) family of transcriptional regulators. The encoded protein may possess histone methyltransferase activity and plays a critical role in cell pluripotency by suppressing the expression of differentiation marker genes. Expression of this gene may play a role in breast cancer. [provided by RefSeq, Dec 2011]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family More than 3 adjacent zinc finger factors
Sub Family unclassified

External references

Ensembl ENSG00000147596
RefSeq NP_078780
Uniprot Q9GZV8
Aliases PFM11
UCSC Gene coordinates chr8:70051125-70071326

External Links

JASPAR PRDM14
Wikipedia PRDM14
WikiGenes PRDM14
Transcription Factor Encylopedia PRDM14    
GeneCards PRDM14
FactorBook PRDM14


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for PRDM14

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for PRDM14