ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

RFX2

Function : regulatory factor X2
Description : This gene is a member of the regulatory factor X gene family, which encodes transcription factors that contain a highly-conserved winged helix DNA binding domain. The protein encoded by this gene is structurally related to regulatory factors X1, X3, X4, and X5. It is a transcriptional activator that can bind DNA as a monomer or as a heterodimer with other RFX family members. This protein can bind to cis elements in the promoter of the IL-5 receptor alpha gene. Two transcript variants encoding different isoforms have been described for this gene, and both variants utilize alternative polyadenylation sites. [provided by RefSeq, Jul 2008]

Classification  

Super Class Helix-turn-helix domains
Class Fork head / winged helix factors
Family RFX-related factors
Sub Family None

External references

Ensembl ENSG00000087903
RefSeq NP_000626
Uniprot P48378
Aliases -
UCSC Gene coordinates chr19:5993163-6110652

External Links

JASPAR MA0600.2
Wikipedia RFX2
WikiGenes RFX2
Transcription Factor Encylopedia RFX2    
GeneCards RFX2
FactorBook RFX2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for RFX2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for RFX2