ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

RXRA

Function : retinoid X receptor alpha
Description : Retinoid X receptors (RXRs) and retinoic acid receptors (RARs) are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors function as transcription factors by binding as homodimers or heterodimers to specific sequences in the promoters of target genes. The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcriptional regulators. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2014]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class Nuclear receptors with C4 zinc fingers
Family RXR-related receptors (NR2)
Sub Family Retinoid X receptors (NR2B)

External references

Ensembl ENSG00000186350
RefSeq NP_001278849
Uniprot P19793
Aliases NR2B1
UCSC Gene coordinates chr9:134326462-134440585

External Links

JASPAR MA0512.2
Wikipedia RXRA
WikiGenes RXRA
Transcription Factor Encylopedia RXRA
GeneCards RXRA
FactorBook RXRA


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for RXRA

MACS - Datasets excluded for RXRA

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for RXRA