ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SATB1

Function : SATB homeobox 1
Description : This gene encodes a matrix protein which binds nuclear matrix and scaffold-associating DNAs through a unique nuclear architecture. The protein recruits chromatin-remodeling factors in order to regulate chromatin structure and gene expression. [provided by RefSeq, Apr 2016]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-CUT factors
Sub Family SATB

External references

Ensembl ENSG00000182568
RefSeq NP_001309805
Uniprot Q01826
Aliases -
UCSC Gene coordinates chr3:18345387-18445587

External Links

JASPAR SATB1
Wikipedia SATB1
WikiGenes SATB1
Transcription Factor Encylopedia SATB1    
GeneCards SATB1
FactorBook SATB1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SATB1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SATB1