ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SIX2

Function : SIX homeobox 2
Description : This gene is a member of the vertebrate gene family which encode proteins homologous to the Drosophila 'sine oculis' homeobox protein. The encoded protein is a transcription factor which, like other members of this gene family, may be involved in limb or eye development. [provided by RefSeq, Dec 2008]

Classification  

Super Class Helix-turn-helix domains
Class Homeo domain factors
Family HD-SINE factors
Sub Family SIX1-like factors

External references

Ensembl ENSG00000170577
RefSeq NP_058628
Uniprot Q9NPC8
Aliases -
UCSC Gene coordinates chr2:45005184-45009644

External Links

JASPAR MA1119.1
Wikipedia SIX2
WikiGenes SIX2
Transcription Factor Encylopedia SIX2    
GeneCards SIX2
FactorBook SIX2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SIX2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SIX2