ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SMARCC1

Function : SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Description : The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. [provided by RefSeq, Jul 2008]

Classification  

Super Class Helix-turn-helix domains
Class Tryptophan cluster factors
Family Myb/SANT domain factors
Sub Family TADA2-like factors

External references

Ensembl ENSG00000173473
RefSeq NP_003065
Uniprot Q92922
Aliases BAF155, CRACC1, Rsc8, SRG3, SWI3
UCSC Gene coordinates chr3:47585887-47781914

External Links

JASPAR SMARCC1
Wikipedia SMARCC1
WikiGenes SMARCC1
Transcription Factor Encylopedia SMARCC1    
GeneCards SMARCC1
FactorBook SMARCC1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SMARCC1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SMARCC1