ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SMC3

Function : structural maintenance of chromosomes 3
Description : This gene belongs to the SMC3 subfamily of SMC proteins. The encoded protein occurs in certain cell types as either an intracellular, nuclear protein or a secreted protein. The nuclear form, known as structural maintenance of chromosomes 3, is a component of the multimeric cohesin complex that holds together sister chromatids during mitosis, enabling proper chromosome segregation. Post-translational modification of the encoded protein by the addition of chondroitin sulfate chains gives rise to the secreted proteoglycan bamacan, an abundant basement membrane protein. [provided by RefSeq, Jul 2008]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000108055
RefSeq NP_005436
Uniprot Q9UQE7
Aliases BAM, BMH, CDLS3, CSPG6, HCAP, SMC3L1
UCSC Gene coordinates chr10:110567690-110604633

External Links

JASPAR SMC3
Wikipedia SMC3
WikiGenes SMC3
Transcription Factor Encylopedia SMC3    
GeneCards SMC3
FactorBook SMC3


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SMC3

MACS - Datasets excluded for SMC3

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SMC3