ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SNAI2

Function : snail family transcriptional repressor 2
Description : This gene encodes a member of the Snail family of C2H2-type zinc finger transcription factors. The encoded protein acts as a transcriptional repressor that binds to E-box motifs and is also likely to repress E-cadherin transcription in breast carcinoma. This protein is involved in epithelial-mesenchymal transitions and has antiapoptotic activity. Mutations in this gene may be associated with sporatic cases of neural tube defects. [provided by RefSeq, Jul 2008]

Classification  

Super Class Zinc-coordinating DNA-binding domains
Class C2H2 zinc finger factors
Family More than 3 adjacent zinc finger factors
Sub Family Snail-like factors

External references

Ensembl ENSG00000019549
RefSeq NP_003059
Uniprot O43623
Aliases SLUG, SLUGH, SLUGH1, SNAIL2, WS2D
UCSC Gene coordinates chr8:48917676-48921439

External Links

JASPAR MA0745.1
Wikipedia SNAI2
WikiGenes SNAI2
Transcription Factor Encylopedia SNAI2
GeneCards SNAI2
FactorBook SNAI2


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SNAI2

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SNAI2