ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SNAPC4

Function : small nuclear RNA activating complex polypeptide 4
Description : This gene encodes the largest subunit of the small nuclear RNA-activating protein (SNAP) complex. The encoded protein contains a Myb DNA-binding domain, and is essential for RNA polymerase II and III polymerase transcription from small nuclear RNA promoters. A mutation in this gene is associated with ankylosing spondylitis. [provided by RefSeq, Jul 2016]

Classification  

Super Class Helix-turn-helix domains
Class Tryptophan cluster factors
Family Myb/SANT domain factors
Sub Family Myb-like factors

External references

Ensembl ENSG00000165684
RefSeq NP_003077
Uniprot Q5SXM2
Aliases PTFalpha, SNAP190
UCSC Gene coordinates chr9:136375570-136400219

External Links

JASPAR SNAPC4
Wikipedia SNAPC4
WikiGenes SNAPC4
Transcription Factor Encylopedia SNAPC4    
GeneCards SNAPC4
FactorBook SNAPC4


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SNAPC4

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SNAPC4