ReMap 2018 v1.2

An integrative ChIP-seq analysis of regulatory regions

SND1

Function : staphylococcal nuclease and tudor domain containing 1
Description : This gene encodes a transcriptional co-activator that interacts with the acidic domain of Epstein-Barr virus nuclear antigen 2 (EBNA 2), a transcriptional activator that is required for B-lymphocyte transformation. Other transcription factors that interact with this protein are signal transducers and activators of transcription, STATs. This protein is also thought to be essential for normal cell growth. A similar protein in mammals and other organisms is a component of the RNA-induced silencing complex (RISC). [provided by RefSeq, Jul 2016]

Classification  

Super Class Unknown
Class Unknown
Family Unknown
Sub Family Unknown

External references

Ensembl ENSG00000197157
RefSeq NP_055205
Uniprot Q7KZF4
Aliases TDRD11, Tudor-SN, p100
UCSC Gene coordinates chr7:127652118-128092606

External Links

JASPAR SND1
Wikipedia SND1
WikiGenes SND1
Transcription Factor Encylopedia SND1    
GeneCards SND1
FactorBook SND1


Genomic visualization & Analyses for MACS

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for MACS

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

MACS - Datasets retained for SND1

Genomic visualization & Analyses for JAMM

Datasets
quality
DNA constraint
Motifs UCSC genome
browser

Downloading peaks and sequences for JAMM

All peaks BED file
Merged peaks
(non-redundant peaks)
BED file
Peak sequences FASTA file

JAMM - Datasets retained for SND1